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SRX9402640: GSM4873700: PRO-seq_20h_SE_Biorep1_Tech_2; Strongylocentrotus purpuratus; OTHER
1 ILLUMINA (Illumina HiSeq 2500) run: 19.2M spots, 5.8G bases, 2.5Gb downloads

Submitted by: NCBI (GEO)
Study: PRO-seq, ATAC-seq, and Pol II ChIP-seq in 20 hour sea urchin embryos (PRO-Seq)
PRJNA673237 • SRP289839 • All experiments • All runs
show Abstracthide Abstract
PRO-seq, ATAC-seq, and Pol II ChIP-seq signals are used to predict active developmental enhancers. Overall design: Machine learning models are trained and tested wit the different epigenetic marks for the prediction of genomic with active reporter gene activity.
Sample: PRO-seq_20h_SE_Biorep1_Tech_2
SAMN16597512 • SRS7620510 • All experiments • All runs
Organism: Strongylocentrotus purpuratus
Library:
Instrument: Illumina HiSeq 2500
Strategy: OTHER
Source: TRANSCRIPTOMIC
Selection: other
Layout: PAIRED
Construction protocol: Density gradient nuclear prep Chu et al., 2018. PMCID: PMC6204104 PRO-seq
Experiment attributes:
GEO Accession: GSM4873700
Links:
Runs: 1 run, 19.2M spots, 5.8G bases, 2.5Gb
Run# of Spots# of BasesSizePublished
SRR1293915619,200,2185.8G2.5Gb2021-06-03

ID:
12273627

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